Refonte du Kernel : premiere version s'executant.

Doxyfile

@@ -58,7 +58,7 @@ PROJECT_LOGO           =
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@@ -844,7 +844,7 @@ WARN_LOGFILE           =
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 # Note: If this tag is empty the current directory is searched.
 
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+INPUT                  = src
 
 # This tag can be used to specify the character encoding of the source files
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Makefile

@@ -7,46 +7,45 @@ FLAGS 		= -g -O3 -Isrc -Wfatal-errors
 QT_INPUT_FILES	= main_window data input physics time geometry initial_state view tank pump pump_tab cloud clouds_tab
 QT_INPUT_MOC_FILES	= main_window physics input view geometry initial_state tank pump_tab pump cloud clouds_tab
 MATH_INPUT_FILES	= poly3 algo spline
-SRC_INPUT_FILES = physics time geometry initial_state source input_data
+KERNEL_INPUT_FILES = physics time geometry initial_state source input_data piccard
 
-QT_OUTPUT_FILES	= main_window kernel output_view output
-QT_OUTPUT_MOC_FILES	= main_window kernel output
+QT_OUTPUT_FILES	= main_window solver output_view output
+QT_OUTPUT_MOC_FILES	= main_window solver output
 MATH_OUTPUT_FILES	= algo
-SRC_OUTPUT_FILES = physics time geometry initial_state source input_data solution kernel
+KERNEL_OUTPUT_FILES = physics time geometry initial_state source input_data solution solver piccard horizontal_problem overland all_vertical_richards richards_evolutive_time richards
 
 
 QT_INPUT_OBJS	= $(addprefix obj/qt/input/,$(addsuffix .o,$(QT_INPUT_FILES)))
 QT_INPUT_MOCS	= $(addprefix moc/input/,$(addsuffix .cpp,$(QT_INPUT_MOC_FILES)))
 MATH_INPUT_OBJS	= $(addprefix obj/math/,$(addsuffix .o,$(MATH_INPUT_FILES)))
-SRC_INPUT_OBJS = $(addprefix obj/,$(addsuffix .o,$(SRC_INPUT_FILES)))
+KERNEL_INPUT_OBJS = $(addprefix obj/kernel/,$(addsuffix .o,$(KERNEL_INPUT_FILES)))
 
 QT_OUTPUT_OBJS	= $(addprefix obj/qt/output/,$(addsuffix .o,$(QT_OUTPUT_FILES)))
 QT_OUTPUT_MOCS	= $(addprefix moc/output/,$(addsuffix .cpp,$(QT_OUTPUT_MOC_FILES)))
 MATH_OUTPUT_OBJS	= $(addprefix obj/math/,$(addsuffix .o,$(MATH_OUTPUT_FILES)))
-SRC_OUTPUT_OBJS = $(addprefix obj/,$(addsuffix .o,$(SRC_OUTPUT_FILES)))
+KERNEL_OUTPUT_OBJS = $(addprefix obj/kernel/,$(addsuffix .o,$(KERNEL_OUTPUT_FILES)))
 
-MATH_KERNEL_OBJS	= $(addprefix obj/math/,$(addsuffix .o,$(MATH_OUTPUT_FILES)))
-SRC_KERNEL_OBJS = $(addprefix obj/,$(addsuffix .o,$(SRC_OUTPUT_FILES)))
+MATH_SOLVER_OBJS	= $(addprefix obj/math/,$(addsuffix .o,$(MATH_OUTPUT_FILES)))
+KERNEL_SOLVER_OBJS = $(addprefix obj/kernel/,$(addsuffix .o,$(KERNEL_OUTPUT_FILES)))
 
 EXE_INPUT = RichardsFastSlowInput
 EXE_OUTPUT = RichardsFastSlowOutput
-EXE_KERNEL = RichardsFastSlowKernel
+EXE_SOLVER = RichardsFastSlowSolver
 
 all: $(EXE_OUTPUT)
 input: $(EXE_INPUT)
 output: $(EXE_OUTPUT)
-kernel: $(EXE_KERNEL)
+solver: $(EXE_SOLVER)
 
-$(EXE_INPUT) : src/main_input.cpp $(SRC_INPUT_OBJS) $(MATH_INPUT_OBJS) $(QT_INPUT_MOCS) $(QT_INPUT_OBJS)
+$(EXE_INPUT) : src/main_input.cpp $(KERNEL_INPUT_OBJS) $(MATH_INPUT_OBJS) $(QT_INPUT_MOCS) $(QT_INPUT_OBJS)
 			$(GPP) $(FLAGS) $(QT_FLAGS) $^ $(QT_LIB) -o $@
 
-$(EXE_OUTPUT) : src/main_output.cpp $(SRC_OUTPUT_OBJS) $(MATH_OUTPUT_OBJS) $(QT_OUTPUT_MOCS) $(QT_OUTPUT_OBJS)
+$(EXE_OUTPUT) : src/main_output.cpp $(KERNEL_OUTPUT_OBJS) $(MATH_OUTPUT_OBJS) $(QT_OUTPUT_MOCS) $(QT_OUTPUT_OBJS)
 			$(GPP) $(FLAGS) $(QT_FLAGS) $^ $(QT_LIB) -o $@
 
-$(EXE_KERNEL) : src/main_kernel.cpp $(SRC_KERNEL_OBJS) $(MATH_KERNEL_OBJS)
+$(EXE_SOLVER) : src/main_solver.cpp $(KERNEL_SOLVER_OBJS) $(MATH_SOLVER_OBJS)
 			$(GPP) $(FLAGS) $^ -o $@
 
-
 obj/qt/%.o : src/qt/%.cpp src/qt/%.hpp
 	$(GPP) $(FLAGS) $(QT_FLAGS) -c $< -o $@
 
@@ -60,4 +59,4 @@ moc/%.cpp : src/qt/%.hpp
 	$(QT_MOC) $< -o $@
 
 clean:
-	-$(RM) $(EXE) moc/input/*.cpp moc/output/*.cpp moc/*.cpp obj/*.o obj/math/*.o obj/qt/input/*.o obj/qt/output/*.o obj/qt/*.o src/*~ src/qt/*~ src/math/*~
+	-$(RM) -r $(EXE) moc/input/*.cpp moc/output/*.cpp moc/*.cpp obj/*.o obj/kernel/*.o obj/math/*.o obj/qt/input/*.o obj/qt/output/*.o obj/qt/*.o src/*~ src/qt/*~ src/math/*~ doc/*

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doc/html/dynsections.js

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-/*
- @licstart  The following is the entire license notice for the JavaScript code in this file.
-
- The MIT License (MIT)
-
- Copyright (C) 1997-2020 by Dimitri van Heesch
-
- Permission is hereby granted, free of charge, to any person obtaining a copy of this software
- and associated documentation files (the "Software"), to deal in the Software without restriction,
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- sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
- furnished to do so, subject to the following conditions:
-
- The above copyright notice and this permission notice shall be included in all copies or
- substantial portions of the Software.
-
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
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- NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
- DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
- OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
-
- @licend  The above is the entire license notice for the JavaScript code in this file
- */
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-{
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-     style="fill:#000000;fill-opacity:0;stroke:#656565;stroke-width:1.4;stroke-opacity:1;stroke-miterlimit:4;stroke-dasharray:none"
-     id="path4611"
-     cx="5.5"
-     cy="8.5"
-     r="3.5" />
-  <path
-     style="fill:#656565;fill-opacity:1;stroke:none;stroke-width:1px;stroke-linecap:butt;stroke-linejoin:miter;stroke-opacity:1"
-     d="M 11,7 13.5,10 16,7 Z"
-     id="path4609"
-     inkscape:connector-curvature="0"
-     sodipodi:nodetypes="cccc" />
-  <path
-     style="fill:none;stroke:#656565;stroke-width:1.4;stroke-linecap:round;stroke-linejoin:miter;stroke-miterlimit:4;stroke-dasharray:none;stroke-opacity:1"
-     d="m 8.1085854,11.109059 2.7823556,2.782356"
-     id="path4630"
-     inkscape:connector-curvature="0" />
-</svg>

doc/html/search/nomatches.html

@@ -1,12 +0,0 @@
-<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
-<html><head><title></title>
-<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
-<link rel="stylesheet" type="text/css" href="search.css"/>
-<script type="text/javascript" src="search.js"></script>
-</head>
-<body class="SRPage">
-<div id="SRIndex">
-<div class="SRStatus" id="NoMatches">No Matches</div>
-</div>
-</body>
-</html>

doc/html/search/search.css

@@ -1,255 +0,0 @@
-/*---------------- Search Box */
-
-#MSearchBox {
-    white-space : nowrap;
-    background: white;
-    border-radius: 0.65em;
-    box-shadow: inset 0.5px 0.5px 3px 0px #555;
-    z-index: 102;
-}
-
-#MSearchBox .left {
-    display: inline-block;
-    vertical-align: middle;
-    height: 1.4em;
-}
-
-#MSearchSelect {
-    display: inline-block;
-    vertical-align: middle;
-    height: 1.4em;
-    padding: 0 0 0 0.3em;
-    margin: 0;
-}
-
-#MSearchField {
-    display: inline-block;
-    vertical-align: middle;
-    width: 7.5em;
-    height: 1.1em;
-    margin: 0 0.15em;
-    padding: 0;
-    line-height: 1em;
-    border:none;
-    color: #909090;
-    outline: none;
-    font-family: Arial, Verdana, sans-serif;
-    -webkit-border-radius: 0px;
-    border-radius: 0px;
-    background: none;
-}
-
-
-#MSearchBox .right {
-    display: inline-block;
-    vertical-align: middle;
-    width: 1.4em;
-    height: 1.4em;
-}
-
-#MSearchClose {
-    display: none;
-    font-size: inherit;
-    background : none;
-    border: none;
-    margin: 0;
-    padding: 0;
-    outline: none;
-
-}
-
-#MSearchCloseImg {
-    height: 1.4em;
-    padding: 0.3em;
-    margin: 0;
-}
-
-.MSearchBoxActive #MSearchField {
-    color: #000000;
-}
-
-#main-menu > li:last-child {
-    /* This <li> object is the parent of the search bar */
-    display: flex;
-    justify-content: center;
-    align-items: center;
-    height: 36px;
-    margin-right: 1em;
-}
-
-/*---------------- Search filter selection */
-
-#MSearchSelectWindow {
-    display: none;
-    position: absolute;
-    left: 0; top: 0;
-    border: 1px solid #90A5CE;
-    background-color: #F9FAFC;
-    z-index: 10001;
-    padding-top: 4px;
-    padding-bottom: 4px;
-    -moz-border-radius: 4px;
-    -webkit-border-top-left-radius: 4px;
-    -webkit-border-top-right-radius: 4px;
-    -webkit-border-bottom-left-radius: 4px;
-    -webkit-border-bottom-right-radius: 4px;
-    -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
-}
-
-.SelectItem {
-    font: 8pt Arial, Verdana, sans-serif;
-    padding-left:  2px;
-    padding-right: 12px;
-    border: 0px;
-}
-
-span.SelectionMark {
-    margin-right: 4px;
-    font-family: monospace;
-    outline-style: none;
-    text-decoration: none;
-}
-
-a.SelectItem {
-    display: block;
-    outline-style: none;
-    color: #000000; 
-    text-decoration: none;
-    padding-left:   6px;
-    padding-right: 12px;
-}
-
-a.SelectItem:focus,
-a.SelectItem:active {
-    color: #000000; 
-    outline-style: none;
-    text-decoration: none;
-}
-
-a.SelectItem:hover {
-    color: #FFFFFF;
-    background-color: #3D578C;
-    outline-style: none;
-    text-decoration: none;
-    cursor: pointer;
-    display: block;
-}
-
-/*---------------- Search results window */
-
-iframe#MSearchResults {
-    width: 60ex;
-    height: 15em;
-}
-
-#MSearchResultsWindow {
-    display: none;
-    position: absolute;
-    left: 0; top: 0;
-    border: 1px solid #000;
-    background-color: #EEF1F7;
-    z-index:10000;
-}
-
-/* ----------------------------------- */
-
-
-#SRIndex {
-    clear:both; 
-    padding-bottom: 15px;
-}
-
-.SREntry {
-    font-size: 10pt;
-    padding-left: 1ex;
-}
-
-.SRPage .SREntry {
-    font-size: 8pt;
-    padding: 1px 5px;
-}
-
-body.SRPage {
-    margin: 5px 2px;
-}
-
-.SRChildren {
-    padding-left: 3ex; padding-bottom: .5em 
-}
-
-.SRPage .SRChildren {
-    display: none;
-}
-
-.SRSymbol {
-    font-weight: bold; 
-    color: #425E97;
-    font-family: Arial, Verdana, sans-serif;
-    text-decoration: none;
-    outline: none;
-}
-
-a.SRScope {
-    display: block;
-    color: #425E97; 
-    font-family: Arial, Verdana, sans-serif;
-    text-decoration: none;
-    outline: none;
-}
-
-a.SRSymbol:focus, a.SRSymbol:active,
-a.SRScope:focus, a.SRScope:active {
-    text-decoration: underline;
-}
-
-span.SRScope {
-    padding-left: 4px;
-}
-
-.SRPage .SRStatus {
-    padding: 2px 5px;
-    font-size: 8pt;
-    font-style: italic;
-}
-
-.SRResult {
-    display: none;
-}
-
-DIV.searchresults {
-    margin-left: 10px;
-    margin-right: 10px;
-}
-
-/*---------------- External search page results */
-
-.searchresult {
-    background-color: #F0F3F8;
-}
-
-.pages b {
-   color: white;
-   padding: 5px 5px 3px 5px;
-   background-image: url("../tab_a.png");
-   background-repeat: repeat-x;
-   text-shadow: 0 1px 1px #000000;
-}
-
-.pages {
-    line-height: 17px;
-    margin-left: 4px;
-    text-decoration: none;
-}
-
-.hl {
-    font-weight: bold;
-}
-
-#searchresults {
-    margin-bottom: 20px;
-}
-
-.searchpages {
-    margin-top: 10px;
-}
-

doc/html/search/search.js

@@ -1,814 +0,0 @@
-/*
- @licstart  The following is the entire license notice for the JavaScript code in this file.
-
- The MIT License (MIT)
-
- Copyright (C) 1997-2020 by Dimitri van Heesch
-
- Permission is hereby granted, free of charge, to any person obtaining a copy of this software
- and associated documentation files (the "Software"), to deal in the Software without restriction,
- including without limitation the rights to use, copy, modify, merge, publish, distribute,
- sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
- furnished to do so, subject to the following conditions:
-
- The above copyright notice and this permission notice shall be included in all copies or
- substantial portions of the Software.
-
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
- BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
- NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
- DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
- OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
-
- @licend  The above is the entire license notice for the JavaScript code in this file
- */
-function convertToId(search)
-{
-  var result = '';
-  for (i=0;i<search.length;i++)
-  {
-    var c = search.charAt(i);
-    var cn = c.charCodeAt(0);
-    if (c.match(/[a-z0-9\u0080-\uFFFF]/))
-    {
-      result+=c;
-    }
-    else if (cn<16)
-    {
-      result+="_0"+cn.toString(16);
-    }
-    else
-    {
-      result+="_"+cn.toString(16);
-    }
-  }
-  return result;
-}
-
-function getXPos(item)
-{
-  var x = 0;
-  if (item.offsetWidth)
-  {
-    while (item && item!=document.body)
-    {
-      x   += item.offsetLeft;
-      item = item.offsetParent;
-    }
-  }
-  return x;
-}
-
-function getYPos(item)
-{
-  var y = 0;
-  if (item.offsetWidth)
-  {
-     while (item && item!=document.body)
-     {
-       y   += item.offsetTop;
-       item = item.offsetParent;
-     }
-  }
-  return y;
-}
-
-/* A class handling everything associated with the search panel.
-
-   Parameters:
-   name - The name of the global variable that will be
-          storing this instance.  Is needed to be able to set timeouts.
-   resultPath - path to use for external files
-*/
-function SearchBox(name, resultsPath, inFrame, label)
-{
-  if (!name || !resultsPath) {  alert("Missing parameters to SearchBox."); }
-
-  // ---------- Instance variables
-  this.name                  = name;
-  this.resultsPath           = resultsPath;
-  this.keyTimeout            = 0;
-  this.keyTimeoutLength      = 500;
-  this.closeSelectionTimeout = 300;
-  this.lastSearchValue       = "";
-  this.lastResultsPage       = "";
-  this.hideTimeout           = 0;
-  this.searchIndex           = 0;
-  this.searchActive          = false;
-  this.insideFrame           = inFrame;
-  this.searchLabel           = label;
-
-  // ----------- DOM Elements
-
-  this.DOMSearchField = function()
-  {  return document.getElementById("MSearchField");  }
-
-  this.DOMSearchSelect = function()
-  {  return document.getElementById("MSearchSelect");  }
-
-  this.DOMSearchSelectWindow = function()
-  {  return document.getElementById("MSearchSelectWindow");  }
-
-  this.DOMPopupSearchResults = function()
-  {  return document.getElementById("MSearchResults");  }
-
-  this.DOMPopupSearchResultsWindow = function()
-  {  return document.getElementById("MSearchResultsWindow");  }
-
-  this.DOMSearchClose = function()
-  {  return document.getElementById("MSearchClose"); }
-
-  this.DOMSearchBox = function()
-  {  return document.getElementById("MSearchBox");  }
-
-  // ------------ Event Handlers
-
-  // Called when focus is added or removed from the search field.
-  this.OnSearchFieldFocus = function(isActive)
-  {
-    this.Activate(isActive);
-  }
-
-  this.OnSearchSelectShow = function()
-  {
-    var searchSelectWindow = this.DOMSearchSelectWindow();
-    var searchField        = this.DOMSearchSelect();
-
-    if (this.insideFrame)
-    {
-      var left = getXPos(searchField);
-      var top  = getYPos(searchField);
-      left += searchField.offsetWidth + 6;
-      top += searchField.offsetHeight;
-
-      // show search selection popup
-      searchSelectWindow.style.display='block';
-      left -= searchSelectWindow.offsetWidth;
-      searchSelectWindow.style.left =  left + 'px';
-      searchSelectWindow.style.top  =  top  + 'px';
-    }
-    else
-    {
-      var left = getXPos(searchField);
-      var top  = getYPos(searchField);
-      top += searchField.offsetHeight;
-
-      // show search selection popup
-      searchSelectWindow.style.display='block';
-      searchSelectWindow.style.left =  left + 'px';
-      searchSelectWindow.style.top  =  top  + 'px';
-    }
-
-    // stop selection hide timer
-    if (this.hideTimeout)
-    {
-      clearTimeout(this.hideTimeout);
-      this.hideTimeout=0;
-    }
-    return false; // to avoid "image drag" default event
-  }
-
-  this.OnSearchSelectHide = function()
-  {
-    this.hideTimeout = setTimeout(this.name +".CloseSelectionWindow()",
-                                  this.closeSelectionTimeout);
-  }
-
-  // Called when the content of the search field is changed.
-  this.OnSearchFieldChange = function(evt)
-  {
-    if (this.keyTimeout) // kill running timer
-    {
-      clearTimeout(this.keyTimeout);
-      this.keyTimeout = 0;
-    }
-
-    var e  = (evt) ? evt : window.event; // for IE
-    if (e.keyCode==40 || e.keyCode==13)
-    {
-      if (e.shiftKey==1)
-      {
-        this.OnSearchSelectShow();
-        var win=this.DOMSearchSelectWindow();
-        for (i=0;i<win.childNodes.length;i++)
-        {
-          var child = win.childNodes[i]; // get span within a
-          if (child.className=='SelectItem')
-          {
-            child.focus();
-            return;
-          }
-        }
-        return;
-      }
-      else
-      {
-        window.frames.MSearchResults.postMessage("take_focus", "*");
-      }
-    }
-    else if (e.keyCode==27) // Escape out of the search field
-    {
-      this.DOMSearchField().blur();
-      this.DOMPopupSearchResultsWindow().style.display = 'none';
-      this.DOMSearchClose().style.display = 'none';
-      this.lastSearchValue = '';
-      this.Activate(false);
-      return;
-    }
-
-    // strip whitespaces
-    var searchValue = this.DOMSearchField().value.replace(/ +/g, "");
-
-    if (searchValue != this.lastSearchValue) // search value has changed
-    {
-      if (searchValue != "") // non-empty search
-      {
-        // set timer for search update
-        this.keyTimeout = setTimeout(this.name + '.Search()',
-                                     this.keyTimeoutLength);
-      }
-      else // empty search field
-      {
-        this.DOMPopupSearchResultsWindow().style.display = 'none';
-        this.DOMSearchClose().style.display = 'none';
-        this.lastSearchValue = '';
-      }
-    }
-  }
-
-  this.SelectItemCount = function(id)
-  {
-    var count=0;
-    var win=this.DOMSearchSelectWindow();
-    for (i=0;i<win.childNodes.length;i++)
-    {
-      var child = win.childNodes[i]; // get span within a
-      if (child.className=='SelectItem')
-      {
-        count++;
-      }
-    }
-    return count;
-  }
-
-  this.SelectItemSet = function(id)
-  {
-    var i,j=0;
-    var win=this.DOMSearchSelectWindow();
-    for (i=0;i<win.childNodes.length;i++)
-    {
-      var child = win.childNodes[i]; // get span within a
-      if (child.className=='SelectItem')
-      {
-        var node = child.firstChild;
-        if (j==id)
-        {
-          node.innerHTML='&#8226;';
-        }
-        else
-        {
-          node.innerHTML='&#160;';
-        }
-        j++;
-      }
-    }
-  }
-
-  // Called when an search filter selection is made.
-  // set item with index id as the active item
-  this.OnSelectItem = function(id)
-  {
-    this.searchIndex = id;
-    this.SelectItemSet(id);
-    var searchValue = this.DOMSearchField().value.replace(/ +/g, "");
-    if (searchValue!="" && this.searchActive) // something was found -> do a search
-    {
-      this.Search();
-    }
-  }
-
-  this.OnSearchSelectKey = function(evt)
-  {
-    var e = (evt) ? evt : window.event; // for IE
-    if (e.keyCode==40 && this.searchIndex<this.SelectItemCount()) // Down
-    {
-      this.searchIndex++;
-      this.OnSelectItem(this.searchIndex);
-    }
-    else if (e.keyCode==38 && this.searchIndex>0) // Up
-    {
-      this.searchIndex--;
-      this.OnSelectItem(this.searchIndex);
-    }
-    else if (e.keyCode==13 || e.keyCode==27)
-    {
-      this.OnSelectItem(this.searchIndex);
-      this.CloseSelectionWindow();
-      this.DOMSearchField().focus();
-    }
-    return false;
-  }
-
-  // --------- Actions
-
-  // Closes the results window.
-  this.CloseResultsWindow = function()
-  {
-    this.DOMPopupSearchResultsWindow().style.display = 'none';
-    this.DOMSearchClose().style.display = 'none';
-    this.Activate(false);
-  }
-
-  this.CloseSelectionWindow = function()
-  {
-    this.DOMSearchSelectWindow().style.display = 'none';
-  }
-
-  // Performs a search.
-  this.Search = function()
-  {
-    this.keyTimeout = 0;
-
-    // strip leading whitespace
-    var searchValue = this.DOMSearchField().value.replace(/^ +/, "");
-
-    var code = searchValue.toLowerCase().charCodeAt(0);
-    var idxChar = searchValue.substr(0, 1).toLowerCase();
-    if ( 0xD800 <= code && code <= 0xDBFF && searchValue > 1) // surrogate pair
-    {
-      idxChar = searchValue.substr(0, 2);
-    }
-
-    var resultsPage;
-    var resultsPageWithSearch;
-    var hasResultsPage;
-
-    var idx = indexSectionsWithContent[this.searchIndex].indexOf(idxChar);
-    if (idx!=-1)
-    {
-       var hexCode=idx.toString(16);
-       resultsPage = this.resultsPath + '/' + indexSectionNames[this.searchIndex] + '_' + hexCode + '.html';
-       resultsPageWithSearch = resultsPage+'?'+escape(searchValue);
-       hasResultsPage = true;
-    }
-    else // nothing available for this search term
-    {
-       resultsPage = this.resultsPath + '/nomatches.html';
-       resultsPageWithSearch = resultsPage;
-       hasResultsPage = false;
-    }
-
-    window.frames.MSearchResults.location = resultsPageWithSearch;
-    var domPopupSearchResultsWindow = this.DOMPopupSearchResultsWindow();
-
-    if (domPopupSearchResultsWindow.style.display!='block')
-    {
-       var domSearchBox = this.DOMSearchBox();
-       this.DOMSearchClose().style.display = 'inline-block';
-       if (this.insideFrame)
-       {
-         var domPopupSearchResults = this.DOMPopupSearchResults();
-         domPopupSearchResultsWindow.style.position = 'relative';
-         domPopupSearchResultsWindow.style.display  = 'block';
-         var width = document.body.clientWidth - 8; // the -8 is for IE :-(
-         domPopupSearchResultsWindow.style.width    = width + 'px';
-         domPopupSearchResults.style.width          = width + 'px';
-       }
-       else
-       {
-         var domPopupSearchResults = this.DOMPopupSearchResults();
-         var left = getXPos(domSearchBox) + 150; // domSearchBox.offsetWidth;
-         var top  = getYPos(domSearchBox) + 20;  // domSearchBox.offsetHeight + 1;
-         domPopupSearchResultsWindow.style.display = 'block';
-         left -= domPopupSearchResults.offsetWidth;
-         domPopupSearchResultsWindow.style.top     = top  + 'px';
-         domPopupSearchResultsWindow.style.left    = left + 'px';
-       }
-    }
-
-    this.lastSearchValue = searchValue;
-    this.lastResultsPage = resultsPage;
-  }
-
-  // -------- Activation Functions
-
-  // Activates or deactivates the search panel, resetting things to
-  // their default values if necessary.
-  this.Activate = function(isActive)
-  {
-    if (isActive || // open it
-        this.DOMPopupSearchResultsWindow().style.display == 'block'
-       )
-    {
-      this.DOMSearchBox().className = 'MSearchBoxActive';
-
-      var searchField = this.DOMSearchField();
-
-      if (searchField.value == this.searchLabel) // clear "Search" term upon entry
-      {
-        searchField.value = '';
-        this.searchActive = true;
-      }
-    }
-    else if (!isActive) // directly remove the panel
-    {
-      this.DOMSearchBox().className = 'MSearchBoxInactive';
-      this.DOMSearchField().value   = this.searchLabel;
-      this.searchActive             = false;
-      this.lastSearchValue          = ''
-      this.lastResultsPage          = '';
-    }
-  }
-}
-
-// -----------------------------------------------------------------------
-
-// The class that handles everything on the search results page.
-function SearchResults(name)
-{
-    // The number of matches from the last run of <Search()>.
-    this.lastMatchCount = 0;
-    this.lastKey = 0;
-    this.repeatOn = false;
-
-    // Toggles the visibility of the passed element ID.
-    this.FindChildElement = function(id)
-    {
-      var parentElement = document.getElementById(id);
-      var element = parentElement.firstChild;
-
-      while (element && element!=parentElement)
-      {
-        if (element.nodeName == 'DIV' && element.className == 'SRChildren')
-        {
-          return element;
-        }
-
-        if (element.nodeName == 'DIV' && element.hasChildNodes())
-        {
-           element = element.firstChild;
-        }
-        else if (element.nextSibling)
-        {
-           element = element.nextSibling;
-        }
-        else
-        {
-          do
-          {
-            element = element.parentNode;
-          }
-          while (element && element!=parentElement && !element.nextSibling);
-
-          if (element && element!=parentElement)
-          {
-            element = element.nextSibling;
-          }
-        }
-      }
-    }
-
-    this.Toggle = function(id)
-    {
-      var element = this.FindChildElement(id);
-      if (element)
-      {
-        if (element.style.display == 'block')
-        {
-          element.style.display = 'none';
-        }
-        else
-        {
-          element.style.display = 'block';
-        }
-      }
-    }
-
-    // Searches for the passed string.  If there is no parameter,
-    // it takes it from the URL query.
-    //
-    // Always returns true, since other documents may try to call it
-    // and that may or may not be possible.
-    this.Search = function(search)
-    {
-      if (!search) // get search word from URL
-      {
-        search = window.location.search;
-        search = search.substring(1);  // Remove the leading '?'
-        search = unescape(search);
-      }
-
-      search = search.replace(/^ +/, ""); // strip leading spaces
-      search = search.replace(/ +$/, ""); // strip trailing spaces
-      search = search.toLowerCase();
-      search = convertToId(search);
-
-      var resultRows = document.getElementsByTagName("div");
-      var matches = 0;
-
-      var i = 0;
-      while (i < resultRows.length)
-      {
-        var row = resultRows.item(i);
-        if (row.className == "SRResult")
-        {
-          var rowMatchName = row.id.toLowerCase();
-          rowMatchName = rowMatchName.replace(/^sr\d*_/, ''); // strip 'sr123_'
-
-          if (search.length<=rowMatchName.length &&
-             rowMatchName.substr(0, search.length)==search)
-          {
-            row.style.display = 'block';
-            matches++;
-          }
-          else
-          {
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doc/html/search/variables_3.html

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doc/html/search/variables_4.html

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doc/html/search/variables_4.js

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doc/html/search/variables_5.html

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doc/html/search/variables_5.js

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doc/latex/Makefile

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-LATEX_CMD=pdflatex
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-all: refman.pdf
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doc/latex/annotated.tex

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-\doxysection{Class List}
-Here are the classes, structs, unions and interfaces with brief descriptions\+:\begin{DoxyCompactList}
-\item\contentsline{section}{\mbox{\hyperlink{class_model}{Model}} }{\pageref{class_model}}{}
-\item\contentsline{section}{\mbox{\hyperlink{class_model_b_c}{Model\+BC}} }{\pageref{class_model_b_c}}{}
-\item\contentsline{section}{\mbox{\hyperlink{class_physics}{Physics}} \\*All physical parameters characterising the soil }{\pageref{class_physics}}{}
-\end{DoxyCompactList}

doc/latex/class_model.tex

@@ -1,29 +0,0 @@
-\hypertarget{class_model}{}\doxysection{Model Class Reference}
-\label{class_model}\index{Model@{Model}}
-\doxysubsection*{Public Member Functions}
-\begin{DoxyCompactItemize}
-\item 
-\mbox{\Hypertarget{class_model_aa3ce844ddeacc18973e22d3fa0e29bbe}\label{class_model_aa3ce844ddeacc18973e22d3fa0e29bbe}} 
-virtual double {\bfseries s} (double)=0
-\item 
-\mbox{\Hypertarget{class_model_a9dd56eabdbc36d3d02a9ddd2fdc89403}\label{class_model_a9dd56eabdbc36d3d02a9ddd2fdc89403}} 
-virtual double {\bfseries ds} (double)=0
-\item 
-\mbox{\Hypertarget{class_model_ad1f9ccfd982f138204448c64424c0d49}\label{class_model_ad1f9ccfd982f138204448c64424c0d49}} 
-virtual double {\bfseries kr} (double)=0
-\item 
-\mbox{\Hypertarget{class_model_afa37e30e48c6df2ac9ca00648e3f645b}\label{class_model_afa37e30e48c6df2ac9ca00648e3f645b}} 
-virtual double {\bfseries dkr} (double)=0
-\end{DoxyCompactItemize}
-
-
-\doxysubsection{Detailed Description}
-
-
-Definition at line 4 of file physics.\+hpp.
-
-
-
-The documentation for this class was generated from the following file\+:\begin{DoxyCompactItemize}
-\item 
-src/physics.\+hpp\end{DoxyCompactItemize}

doc/latex/class_model_b_c.tex

@@ -1,29 +0,0 @@
-\hypertarget{class_model_b_c}{}\doxysection{Model\+BC Class Reference}
-\label{class_model_b_c}\index{ModelBC@{ModelBC}}
-\doxysubsection*{Public Member Functions}
-\begin{DoxyCompactItemize}
-\item 
-\mbox{\Hypertarget{class_model_b_c_a1e46f4792328f9fe4d6d5b4a6de59093}\label{class_model_b_c_a1e46f4792328f9fe4d6d5b4a6de59093}} 
-double {\bfseries s} (double)
-\item 
-\mbox{\Hypertarget{class_model_b_c_a14d78800b6879fbf35151dcd6bbdf276}\label{class_model_b_c_a14d78800b6879fbf35151dcd6bbdf276}} 
-double {\bfseries ds} (double)
-\item 
-\mbox{\Hypertarget{class_model_b_c_a2b36e9f3262f70721a3cd02bf228f60e}\label{class_model_b_c_a2b36e9f3262f70721a3cd02bf228f60e}} 
-double {\bfseries kr} (double)
-\item 
-\mbox{\Hypertarget{class_model_b_c_a2eba756e636c224a819ecaca02fe7eec}\label{class_model_b_c_a2eba756e636c224a819ecaca02fe7eec}} 
-double {\bfseries dkr} (double)
-\end{DoxyCompactItemize}
-
-
-\doxysubsection{Detailed Description}
-
-
-Definition at line 14 of file physics.\+hpp.
-
-
-
-The documentation for this class was generated from the following file\+:\begin{DoxyCompactItemize}
-\item 
-src/physics.\+hpp\end{DoxyCompactItemize}