rawls-tools/run/h_flip_folder.sh

#! /bin/bash
if [ -z "$1" ]
  then
    echo "No argument supplied"
    echo "Need folder argument"
    exit 1
fi

if [ -z "$2" ]
  then
    echo "No argument supplied"
    echo "Need output extension"
    exit 1
fi

if [ -z "$3" ]
  then
    echo "No argument supplied"
    echo "Need output folder"
    exit 1
fi


main_folder=$1
prefix="p3d_"
build_folder="build"

ext=$2
output_folder=$3

for folder in $(ls ${main_folder})
do
  echo $folder
  mkdir -p ${output_folder}/${folder}
  for file in $(ls ${main_folder}/$folder)
  do 
      filename=${main_folder}/${folder}/${file}
      filename_fixed=${filename//\/\//\/}

      IFS='.' read -ra ADDR <<< "${file}"

      filename_without_ext=${ADDR[0]}
      outfile="${filename_without_ext}.${ext}"

      echo ${filename_fixed}
      echo ${output_folder}/${folder}/${outfile}

      #check if filename contains 
      # if [[ "$file" == ${prefix}* ]]; then
            ./${build_folder}/main/rawls_h_flip --image ${filename_fixed} --outfile ${output_folder}/${folder}/${outfile}
      # fi
  done 
done